I have the MGS collection on both Vita and Ps3. I Played MGS2 and 3 extensively on my vita and got a lot of trophies. I Was transfarring, and SOME trophies I earned on my Vita MGS games popped up on my PS3 version, However I was impatient and did not let the game do its thing and quit once the save transfer was complete. I just wanted to transfer my saves quickly.
1) Are trophies earned separately? I don't think they are since I DID earn some for the ps3 version and I haven't even PLAYED the ps3 version of MGS2 and 3 only Vita.
2) Since I quit the game before I got all the trophies, Will the games sync themselves later on? Or Did I eff up royally, and now need to earn the trophies independently?